Gene sequences

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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015947509.1_cds_XP_016489179.1_79731
CDS Infomation	[gene=LOC107809098] [db_xref=GeneID:107809098] [protein=LOW QUALITY PROTEIN: glutamate synthase 1 [NADH], chloroplastic-like] [partial=3'] [exception=unclassified translation discrepancy] [protein_id=XP_016489179.1] [location=join(1264..1653,1737..1856,2432..2545,2655..2807,2905..3005,3088..3184,3629..3738,4198..4301,4424..4603,4687..5030,5177..5247,5338..5807,5923..6792,7107..7261,7557..7679,7681..7728,7814..>8212)] [gbkey=CDS]
Sequence	ATGTCGATTGTTTCGAGTTCTGTGAACAATGGCGTGGTTATGCCATCGCCGGCCAAGAGT CTGGCGGGCCATCAATTGAATGCTATGCCTTTGGGCAGAGTCGGTGTTGGTCTGGGCAGA ACTACTAGGGCCTCTAGATGTTTAGCTAAGAGGACTACCGGTTTCGATAAGAGGTTTTAT GGAGCCAAACTCCGGGCCTCGGGTTCTGAAAGGTTGCACCTTTGGCAATCAGATGGGCCG GGCCAGGCTCCGAAGCTTAAGGTCGTGGTTCGTTCTGCATTGTCTAATGTGCCGGAGAAG CCACTCGGCCTTTACGATCCGTCGTTTGATAAGGACTCTTGTGGCGTTGGGTTTGTGGCT GAACTTTCTGGTGAAAGCAACCGGAAAACGGTTACTGATGCTGTTGAGATGTTAGTTCGG ATGTCTCATAGAGGCGCGTGTGGTTGTGAGACTAATACTGGAGATGGGGCCGGTATTCTT GTGGCTTTGCCTCATGATTTCTACAAGGAGGTAGCAAGTGAGGTTGGATTTGAGCTACCA CCACCTGGCCAATATGCAGTTGGTATGTTCTTCCTACCTACCTCTGAAAGCCGTAGGGAG CAAAGCAAAATTGTATTTACAAAGGTGGCTGAGTCACTCGGGCATACAGTTCTTGGATGG CGTCCAGTCCCTACAGATAATTCGGGGCTGGGCAAGTCTGCATTGCAGACAGAACCTGTC ATTGAGCAAGTGTTTCTGACACCAACTCCTCGGTCAAAGGTCGACTTTGAGCGTCAGATG TATATTCTGAGGAGGGTTTCAATGGTAGCTATCCGCGCTGCTTTAAACCTCCAACATGGT GGCGTGAGAGATTTCTATATATGTTCTCTTTCTTCAAGGACTATTGTTTACAAAGGTCAG TTGAAGCCTAATCAGTTGAAGGAATACTACTATGCAGATTTGGGCAATGAAAGGTTTACG AGCTACATGGCCCTGGTGCATTCTAGGTTCTCTACAAATACCTTTCCTAGTTGGGATCGT GCTCAGCCTATGCGTGTTTTGGGTCATAACGGGGAAATTAACACACTTCGAGGCAACGTG AATTGGATGAGGGCTCGTGAAGGTCTTCTTAAATGCAAAGAGCTTGGCCTTTCAAAGACA GAAATGAAAAAGCTCTTGCCCATTGTTGATGCCAGTTCATCTGACTCAGGAGCTTTTGAC GGTGTACTTGAGCTTCTGCTTCGAGCTGGTAGAAGCCTCCCAGAAGCTGTAATGATGATG ATTCCTGAAGCCTGGCAGAATGACAAGAACATGGATCCTAACCGGAAGGCATTGTATGAG TATTTTTCAGCTCTCATGGAACCATGGGATGGACCTGCCCTTATATCATTTACTGATGGG CGCTATCTTGGAGCTACATTAGATCGGAATGGTCTGCGTCCAGGTCGCTTTTATGTCACA TACAGTGGCAGGGTTGTTATGGCAAGTGAAGTTGGAGTAGTTGATATTCCACCCGAAGAT GTATGCAGAAAAGGTCGACTAAACCCTGGAATGATGCTTCTGGTGGACTTTGAGAACCAT GTTGTTGTAGATGATGAAGCTTTGAAGCAGCAGTACTCTCTCGCAAGACCTTATGGACAG TGGCTTAAAAGGCAAAAGATAGAGCTGAAAGACATTGTTGAGTCTGTAAATAAATCCTAC AGGATCCCTCCACCCATTGCAGGAGTTTTGCCTGCGTTAAATGATGATGACAGTATGGAA AATATGGGGCTTTATGGTTTATTGGCTCCGTTAAAGGCTTTCGGTTACACTGTGGAGTCC TTAGAAATGCTGCTACTTCCAATGGCAAAAGACGGCGTCGAGGCTCTTGGCTCAATGGGA AATGATGCTCCATTAGCAGTGATGTCTAACAGAGAGAAACTTACATTTGAGTATTTCAAG CAGATGTTTGCTCAAGTCACAAACCCTCCTATTGACCCTATAAGGGAAAAAATTGTTACC TCTATGGAATGTATGATTGGTCCTGAAGGAGATCTTACAGAGACCACTGAAGAACAGTGT CACCGCCTCTCACTCAAGGGACCTCTTTTGTCCATTGAAGAAATGGAAGCTGTGAAAAAG ATGAACTACAGAGGGTGGCGCAGTAAGGTTCTTGATATTACCTTCTCCCGAGACCGTGGT ACGAAGGGTCTTGAGGAGACCTTAGATAGGATCTGCTCTGAAGCGCACAACGCGATTCAG GAGGGTTACACAACAATCATTCTTTCTGACAGAGGCTTCTCGCCAAAGCGTGTTGCGGTG AGCTCTTTATTGGCTGTCGGTGCTGTCCATCATCATTTAGTTAAAAAGCTTGAGCGGACT CGTGTTGCACTGATTGTTGAATCTGCTGAGCCACGAGAAGTACACCATTTCTGTACATTG GTAGGATTTGGTGCTGATGCTATCTGCCCTTATTTGGCCGTAGAAGCTATATGGAGACTA CAGGTTGATGGAAAAATCCCACCAAAGTCAACTGGTGAGTTCCGTTCCAAGGATGAGCTT GTCAAGAAATACTTCAAAGCAAGTCATTATGGCATGCAGAAGGTTCTTGCAAAAATGGGC ATATCAACATTGGCATCGTACAAGGGCGCTCAGATTTTTGAGGCAGTTGGCCTTTCATCA GAAGTGATGGAGCGGTGTTTCAATGGAACTCCTAGCAGAGTGGAAGGTGCAACTTTTGAT GCACTTGCAAAAGATGCACTCAAGCTGCATGAACTAGCGTTCCCAGCACGAGCCTTGGCT CCAGGGAGTGCAGAGGCTGTGGCACTCCCTAATCCTGGTGATTATCATTGGAGAAAAGGT GGTGAGATTCACCTTAATGATCCACTTGCCATTGCAAAATTGCAGGAGGCTGCACGAACT AATAGTGTAGCTGCCTACAAAGAATATTCTAAGCGTGTGCAGGAATTAAATAGACAATGC AATTTAAGGGGACTTTTGAAGTTTAAAGAGGCAGAGGTGAAAGTTCCTCTGGAAGAAGTT GAACCAGCAAGTGAGATTGTAAAACGTTTTGTTACTGGAGCCATGAGTTATGGATCAATC TCTTTGGAGGCACATGCTACTCTTGCTATGGCAATGAACAAAATTGGGGGCAAATCTAAC ACAGGTGAGGGTGGTGAGCAACCATCTCGGATGGAGCCTCTTCCTAATGGTTCAATGAAT CCAAAAAGAAGTGCAATTAAGCAGGTTGCAAGTGGTAGATTTGGAGTCTCAAGTTATTAC CTCACAAATGCGGACAAGTTACAGATAAAAATGGCTCAGGGAGCCAAGCCTGGAGAAGGG GGTGAACTTCCTGGACACAAGGTCATTGGTGACATAGCTGTCACTAGGAACTCCACAGCT GGAGTTGGACTAATTAGTCCTCCTCCTCATCATGATATCTACCTATTGANTTCTATTGAG GATCTTGCACAGTTGATTCATGATCTTAAGAATGCAAATCCGGGGGCACGTGTAAGTGTC AAGTTGGTTTCTGAAGCTGGCGTTGGGGTTATTGCTAGCGGTGTTGTCAAGGGACATGCT GATCATGTCTTGATCTCCGGTCATGATGGAGGCACGGGTGCCTCAAGATGGACTGGTATC AAGAGTGCCGGGCTTCCATGGGAACTTGGTCTTGCAGAGACACATCAAACTTTAGTGGCT AATGACCTCCGTGGCCGAACAACACTGCAAACGGATGGCCAATTGAAAACTGGAAGAGAT GTGGCTGTTGCTGCTCTTCTTGGTGCAGAGGAGTTTGGTTTCAGCACTGCTCCCCTCATA ACACTTGGTTGCATAATGATGAGAAAATGCCACAAAAACACTTGCCCTGTGGGAATTGCC ACTCAAGAT

Peptide Sequence

PEP ID	XP_016489179.1
PEP Infomation	PREDICTED: LOW QUALITY PROTEIN: glutamate synthase 1 [NADH], chloroplastic-like, partial [Nicotiana tabacum]
Sequence	MSIVSSSVNNGVVMPSPAKSLAGHQLNAMPLGRVGVGLGRTTRASRCLAKRTTGFDKRFY GAKLRASGSERLHLWQSDGPGQAPKLKVVVRSALSNVPEKPLGLYDPSFDKDSCGVGFVA ELSGESNRKTVTDAVEMLVRMSHRGACGCETNTGDGAGILVALPHDFYKEVASEVGFELP PPGQYAVGMFFLPTSESRREQSKIVFTKVAESLGHTVLGWRPVPTDNSGLGKSALQTEPV IEQVFLTPTPRSKVDFERQMYILRRVSMVAIRAALNLQHGGVRDFYICSLSSRTIVYKGQ LKPNQLKEYYYADLGNERFTSYMALVHSRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNV NWMRAREGLLKCKELGLSKTEMKKLLPIVDASSSDSGAFDGVLELLLRAGRSLPEAVMMM IPEAWQNDKNMDPNRKALYEYFSALMEPWDGPALISFTDGRYLGATLDRNGLRPGRFYVT YSGRVVMASEVGVVDIPPEDVCRKGRLNPGMMLLVDFENHVVVDDEALKQQYSLARPYGQ WLKRQKIELKDIVESVNKSYRIPPPIAGVLPALNDDDSMENMGLYGLLAPLKAFGYTVES LEMLLLPMAKDGVEALGSMGNDAPLAVMSNREKLTFEYFKQMFAQVTNPPIDPIREKIVT SMECMIGPEGDLTETTEEQCHRLSLKGPLLSIEEMEAVKKMNYRGWRSKVLDITFSRDRG TKGLEETLDRICSEAHNAIQEGYTTIILSDRGFSPKRVAVSSLLAVGAVHHHLVKKLERT RVALIVESAEPREVHHFCTLVGFGADAICPYLAVEAIWRLQVDGKIPPKSTGEFRSKDEL VKKYFKASHYGMQKVLAKMGISTLASYKGAQIFEAVGLSSEVMERCFNGTPSRVEGATFD ALAKDALKLHELAFPARALAPGSAEAVALPNPGDYHWRKGGEIHLNDPLAIAKLQEAART NSVAAYKEYSKRVQELNRQCNLRGLLKFKEAEVKVPLEEVEPASEIVKRFVTGAMSYGSI SLEAHATLAMAMNKIGGKSNTGEGGEQPSRMEPLPNGSMNPKRSAIKQVASGRFGVSSYY LTNADKLQIKMAQGAKPGEGGELPGHKVIGDIAVTRNSTAGVGLISPPPHHDIYLLXSIE DLAQLIHDLKNANPGARVSVKLVSEAGVGVIASGVVKGHADHVLISGHDGGTGASRWTGI KSAGLPWELGLAETHQTLVANDLRGRTTLQTDGQLKTGRDVAVAALLGAEEFGFSTAPLI TLGCIMMRKCHKNTCPVGIATQD

Transcript Sequence

Gene sequence data has not been registered.